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- DirectorGreg YaitanesStarsEmily DeschanelDavid BoreanazMichaela ConlinFBI Agent Booth needs forensic anthropologist Dr. Brennan's help to solve the case of a decomposed body found in a pond in Arlington National Cemetery. She agrees to help if she is a full partner in the case.
- DirectorAllan KroekerStarsEmily DeschanelDavid BoreanazMichaela ConlinBones is called on to identify the body of a suicide bomber.
- DirectorPatrick R. NorrisStarsEmily DeschanelDavid BoreanazMichaela ConlinBones and Booth investigate the body of a teenager found hanging in a tree on the grounds of an exclusive private school.
- DirectorAllan KroekerStarsEmily DeschanelDavid BoreanazMichaela ConlinBones and Booth travel to Washington to investigate an arm found in a dead black bear.
- DirectorJesús Salvador TreviñoStarsEmily DeschanelDavid BoreanazMichaela ConlinWhen a young boy goes missing from a mall, Bones is called in to determine if it is his body found in a nearby field.
- DirectorTawnia McKiernanStarsEmily DeschanelDavid BoreanazMichaela ConlinBones and Angela's night out goes bad when Bones kicks someone into a wall and reveals a mummified corpse and a bag of methamphetamines.
- DirectorDavid Hugh JonesStarsEmily DeschanelDavid BoreanazMichaela ConlinA condemned man's lawyer makes a last minute appeal to Bones and Booth to re-examine his case. After looking over the evidence, they determine that the man may not be guilty.
- DirectorSanford BookstaverStarsEmily DeschanelDavid BoreanazMichaela ConlinBones and Booth investigate a missing woman found in a fridge while Bones reconnects with her former professor.
- DirectorGreg YaitanesStarsEmily DeschanelDavid BoreanazMichaela ConlinWhile the gang is quarantined in the lab for Christmas, they search for clues to solve the mystery of a skeleton found in a fallout shelter.
- DirectorGreg YaitanesStarsEmily DeschanelDavid BoreanazMichaela ConlinBones and Booth travel to Los Angeles to investigate a body found on a beach. The case leads them to call girls and plastic surgeons. Back in Washington, Hodgins and Goodman clash while authenticating the remains of an Iron Age warrior.
- DirectorDwight H. LittleStarsEmily DeschanelDavid BoreanazMichaela ConlinBooth and Bones work quickly to solve not only a murder, but also the kidnapping of the victim's child.
- DirectorJames Whitmore Jr.StarsEmily DeschanelDavid BoreanazMichaela ConlinBones and Booth investigate a body found in an alley that is dressed in a costume. The case leads them to a missing teen involved in comic books and a role playing game.
- DirectorSanford BookstaverStarsEmily DeschanelDavid BoreanazMichaela ConlinBones and Booth investigate the body of a woman found in the car of a gang member. The case leads them to a dangerous Central American gang and a Senator.
- DirectorAllan KroekerStarsEmily DeschanelDavid BoreanazMichaela ConlinAfter Bones narrowly avoids being shot while on the way to a blind date, the shooter is thought to be connected to one of two murders she's investigating: one of mob boss James Cugini, the other a victim of serial killer Kevin Hollings.
- DirectorJesús Salvador TreviñoStarsEmily DeschanelDavid BoreanazMichaela ConlinWhen Brennan's mother is found in the Jeffersonian's storage for unidentified remains, Booth opens an official FBI investigation to find out who killed her.
- DirectorCraig Ross Jr.StarsEmily DeschanelDavid BoreanazMichaela ConlinWhen Hodgins and Brennan are buried alive, it's a race against time and a kidnapper who doesn't negotiate.
- DirectorMarita GrabiakStarsEmily DeschanelDavid BoreanazMichaela ConlinThe discovery of two mummified girls has Booth and Bones checking a fun house, a Halloween maze and a church charity for clues that may lead them to a missing girl whose parents believe she's dead.
- DirectorAllison Liddi-BrownStarsEmily DeschanelDavid BoreanazMichaela ConlinA body flies out of an exploding meth lab. As the team tries to identify the body, Booth works on a big case which could boost his career, but he's distracted when his brother shows up and shows some interest in Bones.
- DirectorSteven DePaulStarsEmily DeschanelDavid BoreanazMichaela ConlinBones and Booth fly to China so Brennan can identify some remains. During the flight, a body is discovered inside an oven. Bones and Booth must solve the crime before the flight lands in China.
- DirectorJessica LandawStarsEmily DeschanelDavid BoreanazMichaela ConlinBrennan and Booth investigate the remains of a bodyguard of two children who attend a high security school for the children of important people. Also, Cam hires Brennan's father as a teacher which causes some conflicts for Bones.
- DirectorIan ToyntonStarsEmily DeschanelDavid BoreanazMichaela ConlinThe Gravedigger returns and captures Booth. He wants the evidence that someone has stolen from the case, and he believes that Bones has it. Can the Squints find their friend before Booth becomes the Gravediggers latest casualty?
- DirectorSteven DePaulStarsEmily DeschanelDavid BoreanazMichaela ConlinBooth asks Bones to fix his back again, but she ends up aggravating his condition. While Booth is sidelined, Bones works with Agent Perotta to solve the murder of a woman who was working at a Fantasy convention.
- DirectorIan ToyntonStarsEmily DeschanelDavid BoreanazMichaela ConlinThe murder of a doctor at a Wildlife Reserve gets a little personal for Cam, when the victim turns out to be a former paramour. Angela tries to go celibate to work on her relationship issues.
- DirectorBrad TurnerStarsEmily DeschanelDavid BoreanazMichaela ConlinThe frozen shattered remains of a scientist leads the team to a highly regarded research institute. Angela's father comes to town.
- DirectorSteven DePaulStarsEmily DeschanelDavid BoreanazMichaela ConlinThe flattened remains of a woman are found in a recycling plant, leading the team to a wedding planner, the woman's fiancee, and the owner of an online dating service. As the Squints work to solve the case, Bones and Booth are at odds when it appears that someone they know is cheating on a friend/colleague.
- DirectorIan ToyntonStarsEmily DeschanelDavid BoreanazMichaela ConlinBones returns from Guatemala as Booth is finally cleared for duty; Booth is anxious to prove he's fully recovered, even accepting help from Angela's psychic. Things take an interesting turn when the psychic informs them that there is a mass grave underneath a fountain.
- DirectorGordon LonsdaleStarsEmily DeschanelDavid BoreanazMichaela ConlinA corpse found roasted in a neighborhood party barbecue pit is identified as missing dentist Kurt Bissette. He had not only upset neighbors with his windmill and by nearly poisoning the gay couple's dog but probably was a blackmailer. Trey Johnson, the owners society's handsome young gardener, isn't the only one enjoying residents' infidelity, which isn't the only possible secret or motive either. Meanwhile young Parker seems worried about Booth's lack of female company. Sweets figures out why Arastoo faked his accent.
- DirectorJeannot SzwarcStarsEmily DeschanelDavid BoreanazMichaela ConlinBrennan and Booth are called to investigate what appears to be charred human remains on an electrical fence. The mysterious corpse is later determined to be a mummified Egyptian royal on loan to the Jeffersonian. The anthropological mystery has Brennan in a tizzy, and when the Jeffersonian curator prepping the mummy for exhibition is murdered, the team suspects foul play. Brennan's investigation of the curator sheds new light on the life of the Egyptian royal, turning their case into one of historic proportions. Meanwhile, Brennan goes on a date with Booth's supervisor and former intern, and Sweets' girlfriend Daisy Wick returns to the Jeffersonian.
- DirectorDwight H. LittleStarsEmily DeschanelDavid BoreanazMichaela ConlinWhen the remains of a local chicken farmer is found, the Jeffersonian team is brought in on the case. The team must question the farmer's many enemies in order to solve the case. Meanwhile, Angela launches her own animal-rights campaign.
- DirectorTim SouthamStarsEmily DeschanelDavid BoreanazMichaela ConlinWhen a man dressed as Santa Claus blows himself up during a botched bank robbery, Brennan and Booth work to identify the bomber and determine his motives. Meanwhile, Brennan makes plans to spend Christmas in El Salvador, but her father convinces her to spend the holidays with him and Margaret Whitesell, a newly discovered distant relative.
- DirectorEmile B. LevisettiStarsEmily DeschanelDavid BoreanazMichaela ConlinMr. White and his team of government agents put the Jeffersonian Lab on lock down and demand that Brennan and her forensics team determine a cause of death for an unidentified, but highly classified set of remains. As the team gets to work, their findings lead them to suspect they are investigating one of the most famous presidential assassinations in history. Meanwhile, Booth's boss, Andrew Hacker, helps him break into the lab and determine the motive behind the mystery investigation, and a frustrated Cam worries that Michelle may be keeping a big secret from her.
- DirectorDavid BoreanazStarsEmily DeschanelDavid BoreanazMichaela ConlinThe milestone 100th episode takes viewers back in time six years as Brennan and Booth recount the first case they worked on together. With Sweets finishing his book on their partnership, Brennan and Booth take this opportunity to set the record straight. A young and rebellious FBI Agent Booth seeks the help of an team of anthropological scientists and a street artist to find the evidence that will prove his high-profile suspect guilty. Although in unfamiliar territory, Dr. Brennan, her grad student Zack and Hodgins get right to work, impressing Booth with their knack for uncovering new leads and substantiating his theory about a well-connected district judge. While the case cements a foundation for a successful future partnership, it also reveals the convoluted romantic beginnings of the formidable duo - whose feelings for each other almost destroyed the team but still linger years later.
- DirectorDwight H. LittleStarsEmily DeschanelDavid BoreanazMichaela ConlinWhen human remains are discovered in the belly of a shark, Brennan and Booth are brought in to identify the missing person. Evidence suggesting the victim had been the prey of several fish directs the team's investigation to The Aquarium of the Atlantic, where a guest lecturer and notorious self-help guru preaching the healing power of the ocean has gone missing. Meanwhile, both Brennan and Booth navigate their own relationship when a marine biologist shows interest in Booth.
- DirectorDwight H. LittleStarsEmily DeschanelDavid BoreanazMichaela ConlinThe trial of The Gravedigger hits close to home for members of the team, and everyone at the Jeffersonian must work overtime to uncover the forensic evidence to elicit a conviction.
- DirectorDwight H. LittleStarsEmily DeschanelDavid BoreanazMichaela ConlinAfter a skull and decomposing hands are found in a dumpster, the team must not only solve the crime but also search for the rest of the victim's remains. Identified as Ray Raminsky, the victim turns out to be a bounty hunter in search of Charles Braverman, a man indicted for the murder of a co-worker. Meanwhile, Brennan is asked by Professor Bunsen Jude "The Science Dude" if he can shoot an episode of his children's show from The Jeffersonian Lab with Brennan as his special guest. Brennan initially turns him down, but is surprised when he makes her a deal she can't refuse, so she takes him on as a new "squintern." As the team pieces together the details of the crime, they discover that they are not alone in the hunt for Braverman and find themselves in a chase with an unexpected suspect.
- DirectorJeannot SzwarcStarsEmily DeschanelDavid BoreanazMichaela ConlinOn an isolated construction site, a skateboarder falls over a bump in a concrete slate - part of a young man's skull, identified from a rare dental tattoo as missing former ballet dancer Michael, who left the art to join street hip-hop art at a park with magician Johnny Wizard's informal, yet surprisingly competitive gang. The team follows a mold trace. Booth is however no less preoccupied by the safety of his lover, White House correspondent Hannah Burley, whose investigation for petty police corruption in D.C. proves physically dangerous.
- DirectorIan ToyntonStarsEmily DeschanelDavid BoreanazMichaela ConlinThe Jeffersonian team finds a body in a tree and Dr. Brennan discovers that the victim is practically a clone of herself.
- DirectorDavid BoreanazStarsEmily DeschanelDavid BoreanazMichaela ConlinA severe blizzard causes a city-wide blackout, adding to the obstacles the team must overcome in order to solve a murder case that could be linked to a potential viral outbreak. But when Booth and Brennan find themselves trapped in an elevator during the power outage, Sweets is on hand for outside assistance, but does more than what's asked of him when he initiates a touchy conversation about Booth and Brennan's relationship. Meanwhile, Angela and Hodgins get worrisome news about the health of their unborn baby, and Hodgins and "squint" Wendell Bray get creative in the lab and put their scientific skills to use to identify the victim and the rare disease.
- DirectorDwight H. LittleStarsEmily DeschanelDavid BoreanazMichaela ConlinA mysterious young deaf girl is thought to have committed a recent murder after she's found on the streets, covered in blood and holding a knife. It's up to the Jeffersonian team to figure out who this girl is and determine if she's really the one to blame for the murder.
- DirectorAlex ChappleStarsEmily DeschanelDavid BoreanazMichaela ConlinThe search for Broadsky intensifies as he manages to kill one of the Squints. Angela and Hodgins name their baby. Booth struggles to protect those closest to him, which leads to an unexpected situation.
- DirectorIan ToyntonStarsEmily DeschanelDavid BoreanazMichaela ConlinA generally disliked member of Max Keenan's bowling team's corpse is found as a decomposing mess in the cones machinery when that renovated section is reopened, but he was knocked dead a week earlier. Booth, good at the game, and Bones go undercover as new team members to study players and staff, which yields lots of grim grudges. Wendell has a hard time standing in, with online assistance, for Angela, who finally gives birth.
- DirectorIan ToyntonStarsEmily DeschanelDavid BoreanazMichaela ConlinA paint-ball team accidentally finds in a national park the consumed corpse of a woman, soon identified from dental records as the wife of protestant minister Joseph Serrano. She was declared missing six months ago, then returned with serious amnesia treated by eccentric specialist psychiatrist Dr. David Yarzick, and again recently. Further forensics on corpse and grave reveal traces of water-resistant burial and repeated forms of abuse and different times. Sweets also tries to counsel Booth and Bones as they bicker over the correct impact of their pregnancy on living arrangements and couple dynamics.
- DirectorDwight H. LittleStarsEmily DeschanelDavid BoreanazMichaela ConlinDixie ex-con Finn Abernathy, a genius, joins the team and impresses even Bones. He has to face hard questions about his past and morality but soon bonds with initially hostile Hodges. The case is that of a female eating competitions champion, whose corpse is being eaten from the inside by a live snake. Booth concentrates on her rivals for the impending Gluttony Games, a premiere with a $10,000 prize, her husband and hard-handed manager Brian Tobin. Everyone tries to make Bones understand she must take account of Booth's emotions as a proud father-to-be.
- DirectorAlex ChappleStarsEmily DeschanelDavid BoreanazMichaela ConlinToy company designer Debra Cortez's corpse is found at a dump site, decomposed inside plastic wrapping, with an equally crushed vintage copy of the company's top model, Prince Charmington. The team grills her brother Rick, who was fired from a menial job, her rival designer Lawrence Deighton, boyfriend-doll model Brock Vorback and the CEO Bianca Chiverton. Sweets is determined to earn an FBI gun license, which unleashes stressing attention; mainly from worried Booth and excited Daisy. Meanwhile young and soon-to-be parents wrestle with buying and assembling baby toys.
- DirectorKevin HooksStarsEmily DeschanelDavid BoreanazMichaela ConlinPost staff finds several mail boxes filled with goo - actually a chopped-up human corpse. Their address labels were deliberately messed up so as to strand them in a specialized post office, but a code traces them to a local Ship 'n' Print, where one employee is missing and proved to be the victim. Most of his colleagues resigned after jointly winning a fortune in the lottery. Sweets helps cut trough their endless lies. Booth gets a surprise visit from grandpa, on account of the death of Seeley's ever-absent father, which he's most unwilling to discuss. Bones leaves most of the field work to Booth's ambitious FBI cadet Genevieve Shaw, to accommodate her pregnancy, which renders Clark most uncomfortable.
- DirectorJeannot SzwarcStarsEmily DeschanelDavid BoreanazMichaela ConlinA storm chaser with a shot at becoming professional may be murdered, but his corpse is mangled with half a neighborhood by the last tornado he studied. Booth, assisted by Lance as he refuses to bring his unborn child to danger zones, checks on the brother, who reluctantly financed the victim's top-notch home-made storm chaser-mobile, his surviving driver and competitors. Bones ignores all safety advice to consult storm chasers on the next tornado site. Hodgins comes up with a lullaby contraption and lies to prevent Angela's father from babysitting but revises his opinions on both.
- DirectorChad LoweStarsEmily DeschanelDavid BoreanazMichaela ConlinMetal hardware deliverer Tony Cole was fatally stabbed in a puzzling way. Booth is more preoccupied with his son Parker, finally back from England, and how to fit him in the family with Bones and baby sister Christine, and Sweets is through with counseling under false pretenses. Hodgins uses the case to prove his expensive 'pet' equipment is all useful. Tony had a bitter company rival, Karl Singler, and picked a fight with his beloved boy Danny's karate sensei, Hunter Sherman, over a fight with sprout Blake Sherman.
- DirectorDwight H. LittleStarsEmily DeschanelDavid BoreanazMichaela ConlinA West Virginia truffle hunter's hog stumbles upon a corpse in the woods. The killing may fit in over a century of vicious, vivid feud between the neighboring Babcock and Mobley families, which a lawyer in the family had until recently converted into endless litigation. Natural resources and forbidden love may also prove crucial. Sweets gets to interrogate on his own while Booth is preoccupied with stopping Bones from chasing all baby-caregivers, even her own father.
- DirectorEmile B. LevisettiStarsEmily DeschanelDavid BoreanazMichaela ConlinThe corpse of the boss of the Hollywood studio where extravagant British director Joco Kent is filming "Bone of Contention", an action movie based on a book by Bones, is dropped in a clumsy attempt to cover up a bizarre stabbing. He had enemies and his demise opens opportunities. While investigating, Booth is offered a lucrative security job there. The Jeffersonian team is jealous of scientific consultant Dr. Douglas Filmore, but they all get to prove their worth.
- DirectorDavid BoreanazStarsEmily DeschanelDavid BoreanazMichaela ConlinSuspected serial killer Christopher Pelant, the computer genius, clearly hopes to avoid trial by completely discrediting the Jeffersonian team. Playing on their emotions, each in turn is trapped to commit undeniable, often illegal errors, leading to their dismissal as witness or even suspension from duty, as happens with Booth. Given implicit threats to baby Christine and mounting evidence against Bones herself in the murder of her detained mentor Dr. Ethan Sawyer, Max makes a convincing case she would better disappear until the case is cleared.
- DirectorIan ToyntonStarsEmily DeschanelDavid BoreanazMichaela ConlinMonths later, Brennan is still on the run from the FBI, after being framed for murder by Christopher Pelant. The remaining team searches for the real killer.
- DirectorAllison Liddi-BrownStarsEmily DeschanelDavid BoreanazMichaela ConlinA burned body is found. The victim is a divorce lawyer who had a lot of disgruntled clients. With Brennan back home, she and Booth have to adjust to living together. They have various disagreements about the new routines at home.
- DirectorKate WoodsStarsEmily DeschanelDavid BoreanazMichaela ConlinA man dies in a car explosion. After identifying the man, Booth and Brennan find he is still alive. Turns out, the two guys are twins who did not know of the other. Both men are browbeaten by their wives, one of which wanted her husband dead.
- DirectorDwight H. LittleStarsEmily DeschanelDavid BoreanazMichaela ConlinAn employee is killed in an animal park, and the team determines it is linked to illegal animal trafficking. Dr Sweets and Daisy discuss the current status of their relationship and make a decision.
- DirectorKate WoodsStarsEmily DeschanelDavid BoreanazMichaela ConlinThe team identify a woman's eviscerated body as a co-owner of a natural applesauce store. There is a symmetry to her incisions. Sweets has been living in his office since the breakup with Daisy so Booth invites him to stay with him and Bones.
- DirectorFrançois VelleStarsEmily DeschanelDavid BoreanazMichaela ConlinBrennan, intrigued by Phil Jackson's management style, pulls all her interns together as a team for a project worthy of the basketball coach's philosophy. She charges them with identifying remains that have been determined unidentifiable. For the team, however, it turns out that naming the bodies may be the easiest part of their task when one of them is from 9/11 and they must decide if he is a victim or perpetrator.
- DirectorTim SouthamStarsEmily DeschanelDavid BoreanazMichaela ConlinThe Jeffersonian team investigates the death of a crime scene cleanup expert whose remains are found mysteriously sealed in an impenetrable pod that washed up on the beach. Meanwhile, Angela and Hodgins learn that Cam is involved in a secret romance.
- DirectorIan ToyntonStarsEmily DeschanelDavid BoreanazMichaela ConlinAn artist gluing his artwork on a billboard slips and falls with his glue on top of a corpse. The team has to separate the artist from the bones. Angela realizes the artist is a famous street painter. Bones takes up comedy to find suspects.
- DirectorMilan CheylovStarsEmily DeschanelDavid BoreanazMichaela ConlinThe team talk to the deceased teenaged victim as if he is alive. A psychic visits and says the victim called her to help with the case. The boy's spirit affects everyone as they look for his killer.
- DirectorAlex ChappleStarsEmily DeschanelDavid BoreanazMichaela ConlinBrennan and Booth enter a dance competition to find a killer of a contestant. After the killer is caught, Brennan still wants to enter the competition for the judges.
- DirectorJeannot SzwarcStarsEmily DeschanelDavid BoreanazMichaela ConlinAn archaeologist is found murdered. His lab holds ancient remains of Neanderthals and Homosapiens; these are given to Clark to research. Brennan is jealous that she has to work the current case and not the ancient one.
- DirectorRob HardyStarsEmily DeschanelDavid BoreanazMichaela ConlinAfter Hodgins and Angela were drugged and woke up to a bloody corpse hanging in the canopy of their bed and flower petals around their son Michael's crib, they are forced to believe that Pelant is back for revenge against Hodgins. Although Hodgins wants to go after Pelant directly, Booth knows it's best to work within the system and not go against protocol. Meanwhile, as the Jeffersonian team investigates the corpse, they discover the victim was a Special Forces agent working for the world's biggest supplier of mercenaries, and Angela and Hodgins decide to start an investigation without the rest of the Jeffersonian team for the sake of their family.
- DirectorMilan CheylovStarsEmily DeschanelDavid BoreanazMichaela ConlinThe Jeffersonian team investigates the remains of two bodies that were found at the same burial plot: one of a female cancer patient; the other, the doula who was guiding her through her grieving process with the illness. Meanwhile, with a spotlight on the case, Brennan and Booth start discussing their individual choices for after-death arrangements. Also, Daisy Wick returns for her first case after her break-up with Sweets.
- DirectorTawnia McKiernanStarsEmily DeschanelDavid BoreanazMichaela ConlinThe dismembered body of a roller derby skater means Angela goes undercover at the rink to find more clues to the woman's murder. Elsewhere, Cam worries over the sheer number of doctor appointments Booth is going to, and presses him for details.
- DirectorFrançois VelleStarsEmily DeschanelDavid BoreanazMichaela ConlinWhen Brennan is shot while working late at the Jeffersonian lab, she is rushed to the hospital in critical condition. While at the hospital, she struggles with visions of her mother that defy her usual logic. Meanwhile all evidence suggests that Brennan's attacker may be linked to the Jeffersonian.
- DirectorJeffrey WalkerStarsEmily DeschanelDavid BoreanazMichaela ConlinThe Jeffersonian team investigates the remains of a 15-year-old boy. Although his mother and few close friends saw him as intelligent with poor social skills, the team discovers that this seemingly innocent boy was actually involved in illegal activity and had attended a high school party two weeks prior where drugs were present. The investigation takes an ugly turn when an underage girl confesses to being raped and the deceased boy's reputation is compromised. Meanwhile, with the case's spotlight on deception, intern Finn Abernathy contemplates telling Cam that her daughter Michelle is in town visiting for the weekend.
- DirectorDwight H. LittleStarsEmily DeschanelDavid BoreanazMichaela ConlinWhen extremely educated new intern Dr. Oliver Wells starts working at the Jeffersonian, his quick-learning, enthusiastic personality challenges Brennan as he gets under her skin with his eccentric but undeniable observations, causing her to try to be more open-minded about many scientific questions. Meanwhile, Booth worries she may have gone too far when she accepts the possibility of time travel as a factor in a murder investigation.
- DirectorTim SouthamStarsEmily DeschanelDavid BoreanazMichaela ConlinThe Jeffersonian team investigates the death of Symchay Conteh, a young man whose remains were found in a barrel at a hazardous waste disposal facility. They discover that the victim was an immigrant from Sierra Leone working numerous part-time jobs in order to make ends meet Meanwhile, as the team gets deeper into the investigation, Cam and Arastoo find it even more difficult to keep their relationship a secret and Brennan and Booth try to decide on a vacation destination.
- DirectorKate WoodsStarsEmily DeschanelDavid BoreanazMichaela ConlinWhen the Jeffersonian team investigates the death of a former Marine sergeant whose remains were found burned to a crisp, they discover that she was discharged after a fist fight with another Marine. When Booth and Sweets go to question the other Marine involved in the altercation, they learn that Deanna was obsessed with the idea of the apocalypse, which leads the team to a following of doomsday preppers who become key suspects in her death. Meanwhile, Sweets thinks he has landed his dream apartment but Brennan and Booth are not convinced that he will actually move out.
- DirectorFrançois VelleStarsEmily DeschanelDavid BoreanazMichaela ConlinAn undercover police officer, who was investigating a string of ATM robberies, turns up dead in a van with a bag of diamonds found inside his mutilated body. So the Jeffersonian team must figure out whether or not the ATM robbers are also murderers, or if the cop was crooked. Meanwhile, Brennan is the subject of a documentary commissioned to raise funds for the Jeffersonian, and she struggles to be likeable on camera.
- DirectorJeannot SzwarcStarsEmily DeschanelDavid BoreanazMichaela ConlinThe Jeffersonian team investigates the murder of a TV producer. Meanwhile, Brennan has trouble accepting the fact that Christine might be an "average" child, when her daughter gets accused of biting another classmate. Then, Hodgins uses all of his tools at the Jeffersonian to chemically recreate Finn's (guest star Luke Kleintank) special hot sauce.
- DirectorReginald HudlinStarsEmily DeschanelDavid BoreanazMichaela ConlinThe Jeffersonian team investigates the murder of Jack Spindler, a successful employee at a brokerage firm by day, but a stripper by night. When the team learns how Spindler's moonlighting affected his personal life, they start to question the people closest to him, including his stripper friend, Storm. Meanwhile, Booth's mother shows up after a 24-year absence in his life and makes a special request of him.
- DirectorChad LoweStarsEmily DeschanelDavid BoreanazMichaela ConlinThe Jeffersonian team rushes to prevent a viral outbreak while investigating the murder of journalist Mia Garrett after her infected body is found at a biohazard facility. When the mutated virus that killed Mia infects Jeffersonian intern Arastoo Vaziri, their only chance of saving him is by solving the murder. Tension and passion build as the team races against the clock to find the killer - and the cure.
- DirectorDavid BoreanazStarsEmily DeschanelDavid BoreanazMichaela ConlinWhen evil tech genius Christopher Pelant returns to toy with the Jeffersonian team in their newest investigation, they discover that the string of murders that have been occurring are tied to FBI agents close to Booth. Meanwhile, as the investigation unfolds, Sweets realizes that the evidence seems all too familiar to him and Brennan starts evaluating her relationship with Booth when signs begin to point to him as a potential target of Pelant's.
- DirectorIan ToyntonStarsEmily DeschanelDavid BoreanazMichaela ConlinBones is hurt that Booth withdrew his acceptance of her proposal, and the team sides with her. Eventually she realizes he must have a reason and she trusts him. A government accountant is murdered and the CIA is also interested in the case.
- DirectorAlex ChappleStarsEmily DeschanelDavid BoreanazMichaela ConlinA dead man is identified and was last seen at a couples retreat where he was with a woman other than his wife. Booth and Bones attend the retreat undercover to find evidence. Cam's identity is stolen. Sweets takes a break from his job.
- DirectorIan ToyntonStarsEmily DeschanelDavid BoreanazMichaela ConlinSweets is on sabbatical from the FBI and volunteering in a poor Mexican community. When a victim found burned in a car turns out to be someone from the community, Booth asks for Sweets' help.
- DirectorKate WoodsStarsEmily DeschanelDavid BoreanazMichaela ConlinThe team creates a fake murder scene to mimic the work of Chris Pelant, hoping Pelant will contact them about a copycat killer.
- DirectorChad LoweStarsEmily DeschanelDavid BoreanazMichaela ConlinA man's body is found off a mountain cliff. He was a teacher who had terminal cancer and was trying to fulfill the items on his bucket list before he died. His friend helped him a bit too much. Booth and Brennan plan their wedding.
- DirectorKevin HooksStarsEmily DeschanelDavid BoreanazMichaela ConlinBrennan and Booth are to be married tomorrow, but not without a murder to solve. The team calls in all interns to help with the case so Brennan does not have to do anything.
- DirectorJeannot SzwarcStarsEmily DeschanelDavid BoreanazMichaela ConlinBrennan & Booth are in Buenos Aires for their honeymoon. Brennan is not used to sitting idle so she takes Booth to a morgue, and she finds unidentified bones of a victim. She and Booth help the local police solve the crime.
- DirectorKevin HooksStarsEmily DeschanelDavid BoreanazMichaela ConlinThe team investigates a man whose main form of income is donating sperm. He was popular to prospective parents due to his looks and intellect. Also, Brennan and another mystery writer exchange criticisms about each others books.
- DirectorDwight H. LittleStarsEmily DeschanelDavid BoreanazMichaela ConlinBrennan is a juror on the case of professional soccer player Peter Kidman, who is accused of murdering his wife. When she uses pure objectivity to help prove the killer not guilty, his best friend and a key witness in the case turns up dead. The Jeffersonian team must work together to prove that the soccer star was in fact guilty of killing both his wife and his friend.
- DirectorChad LoweStarsEmily DeschanelDavid BoreanazMichaela ConlinThe team works to find out why a promising young gymnast was murdered, while Cam confronts an identity thief.
- DirectorAllison Liddi-BrownStarsEmily DeschanelDavid BoreanazMichaela ConlinThe Jeffersonian team investigates the death of Lana Brewster, a girl whose remains are delivered to Brennan and Booth's home by someone who believes her death 18 years ago was no accident. When the team discovers that Lana was murdered and her death was covered up, people from her past become key suspects, including an ex-boyfriend with whom Hodgins was friends. Meanwhile, Brennan starts having dreams again about evil tech genius Pelant, and about a potentially more heinous killer, whom she realizes could be involved with Lana's death.
- DirectorRob HardyStarsEmily DeschanelDavid BoreanazMichaela ConlinWhen a children's TV show actor is found dead, the Jeffersonian team goes behind the scenes to uncover who murdered everyone's favorite character, "Carrot Bill". But when the team discovers that the actor was known for his promiscuity, they start to uncover some unlikely suspects. Meanwhile, Booth and Brennan plan Christine's first birthday party, and Clark asks the team for their opinions on a fictional novel he's completed.
- DirectorMilan CheylovStarsEmily DeschanelDavid BoreanazMichaela ConlinThe Jeffersonian team investigates the murder of a woman whose remains were found in a swamp. When the team realizes that her body was cryogenically frozen before it was disposed, it leads them to a cryogenic preservation facility where they learn more about the victim's personal life. Meanwhile, Cam is hesitant to meet Arastoo's father and mother for the first time and Booth is up for a huge promotion that could uproot his entire family.
- DirectorIan ToyntonStarsEmily DeschanelDavid BoreanazMichaela ConlinBooth is in prison after being framed for killing three FBI agents. Now it is up to Brennan, Sweets and the rest of the Jeffersonian team to find out who in the FBI is behind the Conspiracy.
- DirectorDwight H. LittleStarsEmily DeschanelDavid BoreanazMichaela ConlinThe team puts their beloved psychologist to rest. But before they can, they need his help to find his killer who can help them get even closer to who is behind the conspiracy.
- DirectorTim SouthamStarsEmily DeschanelDavid BoreanazMichaela ConlinWith the help of "squintern" Rodolfo Fuentes, the Jeffersonian team investigates the murder of a controversial conservative radio host whose remains were found in a storm drain. When the team discovers some of his extracurricular activities, they come across shocking evidence that narrows down the suspects. Meanwhile, Special Agent James Aubrey is desperate to gain the trust of Booth, and Brennan is worried about Booth's psychological well-being after recent events.
- DirectorMilan CheylovStarsEmily DeschanelDavid BoreanazMichaela ConlinThe Jeffersonian team, with the help Special Agent James Aubrey, investigate the murder of a video game designer whose remains were found washed up in a river. When the team uncovers more about the fortune the victim had acquired throughout his career, everyone who was close to him becomes a suspect. However, the investigation takes a turn when they discover that the victim was playing his own games on people. Meanwhile, "squintern" Jessica Warren enlightens the team about the educational cooperative with which she has been involved and Brennan and Booth discuss Christine's future.
- DirectorChad LoweStarsEmily DeschanelDavid BoreanazMichaela ConlinBrennan gives a keynote speech at a convention for forensic scientists, who are all eager to help when the remains of a body are discovered in a stairwell, but the Jeffersonian team are stunned when Hodgins becomes a murder suspect.
- DirectorAllison Liddi-BrownStarsEmily DeschanelDavid BoreanazMichaela ConlinThe Jeffersonian team investigates the murder of an immigrant maid whose remains were found on the side of the road. The victim's wealthy former employer, Sandra Zins, is a key suspect in the case, but when the team discovers that the victim might have been brought into the country illegally, the team realizes the case is much bigger than it seemed. Amidst talks of marriage between Cam and "squintern" Arastoo, tensions rise between Brennan and Cam as Arastoo prepares his dissertation for Brennan's approval.