Apparently his "lost" film La cravate (1957) has been found as it is now available as Bonus Material in the "Films of Alejandro Jodorowshy" DVD collection.
He had planned to do a feature film version of Frank Herbert's
"Dune."
His film El Topo (1970) became one of the first super hits at midnight
showings, commencing at the Elgin Theater in the Chelsea neighborhood of Manhattan.